The detailed information of tRNA gene sequence


Sequence ID>WENV183764423
Genome IDPPYE01319738
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 52289
End posion on genome 52200
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atctatcaac
tRNA gene sequence 
GGGCAGGTGTCAGAGTGGTCGAATGAGCACGCCTGGAAAGTGTGTGTACTGGCAACAGTA
CCGAGGGTTCGAATCCCTCCCTGTCCGCCA
Downstream region at tRNA end position 
tcaatttttt
Secondary structure (Cloverleaf model)
>WENV183764423	Ser	GGA
                   c      GCCA tcaatttttt
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C T       G A G G G     C
    G         | | |                 T T
    T       A T G A
      C G A        G     TGTACTGGCAACAGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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