The detailed information of tRNA gene sequence


Sequence ID>WENV183764899
Genome IDPPYE01322357
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1400
End posion on genome 1497
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatgtgatat
tRNA gene sequence 
GGGGGTAGTTGGGTGACTGGTGTGCCTCCTGGTCTTCAAAACCAGTGTGGGGCGTTAAGA
GCGTCCCGGGTGGGTTCGATTCCCACATGCCTCCGCCA
Downstream region at tRNA end position 
aaaaagtgtt
Secondary structure (Cloverleaf model)
>WENV183764899	SeC	TCA
                   t      GCCA aaaaagtgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    T     C A C C C     A
      C A G        T      | | | | |     G
    T       T G G G       G T G G G     C
    G       + | | +                 T T
    G       G C C T
      T G T        C     TGTGGGGCGTTAAGAGCGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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