The detailed information of tRNA gene sequence


Sequence ID>WENV183765201
Genome IDPPYE01333301
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1158
End posion on genome 1071
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attaagcatt
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGAACTGCGAGGTTCC
GGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
agtaacatag
Secondary structure (Cloverleaf model)
>WENV183765201	Ser	TGA
                   t      GCCA agtaacatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAACTGCGAGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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