The detailed information of tRNA gene sequence


Sequence ID>WENV183765239
Genome IDPPYE01335501
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 764
End posion on genome 671
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgaactttag
tRNA gene sequence 
GGAAACGTTTCGTCACCGGTGTGGCGCCCAGTCTTCAAAACTGGTGGACGGTCGAAAGGT
CGTTGGTAGGTTCGACTCCTATACGTTTCCGCCA
Downstream region at tRNA end position 
aaaagaatcc
Secondary structure (Cloverleaf model)
>WENV183765239	SeC	TCA
                   g      GCCA aaaagaatcc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C - G
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGTCGAAAGGTCGTTG
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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