The detailed information of tRNA gene sequence


Sequence ID>WENV183765738
Genome IDPPYE01342979
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 14316
End posion on genome 14225
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cactcaccat
tRNA gene sequence 
GGAGAGATGGCTGAGTTGGTCGAAGGCGCACGATTGGAAATCGTGTAGGCGTTAATAGCG
TCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atagaaaagc
Secondary structure (Cloverleaf model)
>WENV183765738	Ser	GGA
                   t      GCCA atagaaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    C G A          G     TAGGCGTTAATAGCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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