The detailed information of tRNA gene sequence


Sequence ID>WENV183767358
Genome IDPPYE01366658
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 471
End posion on genome 395
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cagaatatgc
tRNA gene sequence 
GGGCTAGTAGCTCAGTTGGTCAGAGCTGGCGGCTCATAACCGCTTGGTCCCGGGTTCAAG
TCCTGGCTGGCCCACCA
Downstream region at tRNA end position 
aaaaagcacg
Secondary structure (Cloverleaf model)
>WENV183767358	Ile2	CAT
                   c      ACCA aaaaagcacg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     G - C          T G
                    T     G G T C C     A
      T G A        A      | | + | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        T     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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