The detailed information of tRNA gene sequence


Sequence ID>WENV183767703
Genome IDPPYE01382532
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 171
End posion on genome 82
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagcaatcat
tRNA gene sequence 
GGAGGATTACCCAAGTCTGGCTGAAGGGAACGGTCTTGAAAACCGTCAGGTGGGTAAAAC
CACGCAAGAGTTCGAATCTCTTATCCTCCTttt
Downstream region at tRNA end position 
tattatcgcg
Secondary structure (Cloverleaf model)
>WENV183767703	Ser	TGA
                   t      Tttt tattatcgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T T C T C     A
    C T G A        A      | | | | |     G
  T         A C C C       A A G A G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGTGGGTAAAACCACGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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