The detailed information of tRNA gene sequence


Sequence ID>WENV183768400
Genome IDPPYE01387405
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 5490
End posion on genome 5414
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnnct
tRNA gene sequence 
GGCTCGGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGAGGGTTCAAG
TCCCTTCCGAGTCGCCA
Downstream region at tRNA end position 
cttactttct
Secondary structure (Cloverleaf model)
>WENV183768400	Asp	GTC
                   t      GCCA cttactttct
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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