The detailed information of tRNA gene sequence


Sequence ID>ENV08001382
Genome IDABMX01000733
Search identical group
Phylum/Classfish metagenome; microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease
Species
Start position on genome 88
End posion on genome 13
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tgtccgtctt
tRNA gene sequence 
GGCCTGGTAGCTCAGTTGGTAGAGCAGAGGATTGAAAATCCTTGTGTCGGTGGTTCGATT
CCGCCCCGGGCCACCA
Downstream region at tRNA end position 
agttacaaga
Secondary structure (Cloverleaf model)
>ENV08001382	Phe	GAA
                   t      ACCA agttacaaga
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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