The detailed information of tRNA gene sequence


Sequence ID>WENV183769259
Genome IDPPYE01413339
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 23625
End posion on genome 23698
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttgacaatat
tRNA gene sequence 
CGCGGTGTGGAGCAGTTGGTAGCTCGCCAGGCTCATAACCTGGAGGTCGCATGTTCGAGT
CCTGCCGCCGCAACta
Downstream region at tRNA end position 
atatcgggta
Secondary structure (Cloverleaf model)
>WENV183769259	fMet	CAT
                   t      ACta atatcgggta
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | | |   |     G
    T       C G A G       G C A T G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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