The detailed information of tRNA gene sequence


Sequence ID>WENV183769730
Genome IDPPYE01426533
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1182
End posion on genome 1106
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gtattatact
tRNA gene sequence 
TGAGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCGGCCCCCGCAACCA
Downstream region at tRNA end position 
ccaagcaggt
Secondary structure (Cloverleaf model)
>WENV183769730	fMet	CAT
                   t      ACCA ccaagcaggt
                     T - A
                     G - C
                     A   G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | + + | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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