The detailed information of tRNA gene sequence


Sequence ID>WENV183770164
Genome IDPPYE01432887
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 24446
End posion on genome 24534
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcaggcgtt
tRNA gene sequence 
GGAGAAATACTCAAGTGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGACGGTTCGCGCCG
TGCGAGGGTTCAAATCCCTCTTTCTCCGCtg
Downstream region at tRNA end position 
acagtgaaaa
Secondary structure (Cloverleaf model)
>WENV183770164	Ser	GCT
                   t      GCtg acagtgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGACGGTTCGCGCCGTGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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