The detailed information of tRNA gene sequence


Sequence ID>WENV183770251
Genome IDPPYE01433159
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 377
End posion on genome 290
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attcaggcga
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGAAACCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGttt
Downstream region at tRNA end position 
ggtgcctatg
Secondary structure (Cloverleaf model)
>WENV183770251	Ser	GCT
                   a      Gttt ggtgcctatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGAAACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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