The detailed information of tRNA gene sequence


Sequence ID>WENV183770578
Genome IDPPYE01437425
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 797
End posion on genome 894
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaagaatcag
tRNA gene sequence 
GGGGGTAGATGGGTGACTGGTGTGCCTCCTAGTCTTCAAAACTAGTGTGGGGCGTTAGGA
GCGTCCCGGGTGGGTTCGATTCCCACATGCCTCCGCCA
Downstream region at tRNA end position 
gaaaacggct
Secondary structure (Cloverleaf model)
>WENV183770578	SeC	TCA
                   g      GCCA gaaaacggct
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    A     C A C C C     A
      C A G        T      | | | | |     G
    T       T G G G       G T G G G     C
    G       + | | +                 T T
    G       G C C T
      T G T        C     TGTGGGGCGTTAGGAGCGTCCCGG
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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