The detailed information of tRNA gene sequence


Sequence ID>WENV183770626
Genome IDPPYE01438415
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 2616
End posion on genome 2540
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ggcgcaatga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGCCGGGCTCATAACCCGGAGGTCGTAGGTTCAAA
TCCTGCCCCCGCGACCA
Downstream region at tRNA end position 
agaagtttta
Secondary structure (Cloverleaf model)
>WENV183770626	fMet	CAT
                   a      ACCA agaagtttta
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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