The detailed information of tRNA gene sequence


Sequence ID>WENV183770798
Genome IDPPYE01446469
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 372
End posion on genome 281
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgggcatttT
tRNA gene sequence 
GGAGAAGTACCCAAGCTGGCCGAAGGGGCTCCCCTGGAAAGGGAGTAGGTCGTTAGTAGC
GGCGCGAGGGTTCAAATCCCTCCTTCTCCGTtg
Downstream region at tRNA end position 
ctttctgaac
Secondary structure (Cloverleaf model)
>WENV183770798	Ser	GGA
                   T      GTtg ctttctgaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    T C G A        A      | | | | |     A
  G         A C C C       G A G G G     C
  G           | | |                 T T
  C         A G G G
    C G A          G     TAGGTCGTTAGTAGCGGCGC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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