The detailed information of tRNA gene sequence


Sequence ID>WENV183771429
Genome IDPPYE01456065
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 6610
End posion on genome 6535
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttgcatat
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCGTGCCGAGGGTTCAAGT
CCTTCTGCCCCTGCCA
Downstream region at tRNA end position 
tcaagaaacg
Secondary structure (Cloverleaf model)
>WENV183771429	Trp	CCA
                   t      GCCA tcaagaaacg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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