The detailed information of tRNA gene sequence


Sequence ID>WENV183771458
Genome IDPPYE01456790
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 5426
End posion on genome 5355
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
AGGAGCATAGTTCAAGGGTAGAATAGCGGTCTCCAAAACCGTTGATGGGAGTTCGAATCT
CTCTGCTCCTGCta
Downstream region at tRNA end position 
aaagataaaa
Secondary structure (Cloverleaf model)
>WENV183771458	Trp	CCA
                   t      GCta aaagataaaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T          T A
                    T     C T C T C     A
        A A        A      | + | | |     G
      G     C T T G       G G G A G     C
      G     | | | +                 T T
      G     G A A T
        T A        A     TGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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