The detailed information of tRNA gene sequence


Sequence ID>ENV08001405
Genome IDABMY01018718
Search identical group
Phylum/Classfish metagenome; microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling
Species
Start position on genome 102
End posion on genome 26
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
nnnnnnnncg
tRNA gene sequence 
TCGGCTGTAGCTCAGCTGGATAGAGTACTTGGCTACGAACCAAGGGGTCGTGGGTTCGAT
TCCTGCCAGCCGCACCA
Downstream region at tRNA end position 
gatttaaagg
Secondary structure (Cloverleaf model)
>ENV08001405	Arg	ACG
                   g      ACCA gatttaaagg
                     T   C
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     C G T C C     A
      C G A        A      | + + | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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