The detailed information of tRNA gene sequence


Sequence ID>ENV08001407
Genome IDABMY01051494
Search identical group
Phylum/Classfish metagenome; microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling
Species
Start position on genome 3
End posion on genome 78
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
GGCCTGGTAGCTCAGTTGGTAGAGCAGAGGATTGAAAATCCTTGTGTCGGTGGTTCGATT
CCGCCCCGGGCCACCA
Downstream region at tRNA end position 
agttacaaga
Secondary structure (Cloverleaf model)
>ENV08001407	Phe	GAA
                   t      ACCA agttacaaga
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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