The detailed information of tRNA gene sequence


Sequence ID>ENV08001408
Genome IDABMZ01000076
Search identical group
Phylum/Classfish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease
Species
Start position on genome 89
End posion on genome 15
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tttgagtttt
tRNA gene sequence 
GGCCCGTTGGTCAAGTGGTTAAGACACCTCCCTTTCACGGAGGTAACAGGGGTTCGAGTC
CCCTACGGGTCACCA
Downstream region at tRNA end position 
ataatcccca
Secondary structure (Cloverleaf model)
>ENV08001408	Glu	TTC
                   t      ACCA ataatcccca
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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