The detailed information of tRNA gene sequence


Sequence ID>ENV08001416
Genome IDABMZ01003294
Search identical group
Phylum/Classfish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease
Species
Start position on genome 96
End posion on genome 26
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cgatagacgc
tRNA gene sequence 
GCGGGCGTAGTTTAATGGTAGAACTTCAGCCTTCCAAGCTGATCGCGCGGGTTCGATTCC
CGCCGCCCGCTtta
Downstream region at tRNA end position 
cagaaaaaga
Secondary structure (Cloverleaf model)
>ENV08001416	Gly	TCC
                   c      Ttta cagaaaaaga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C G C C C     A
        A A        A      | | | | |     G
      T     T T T G       G C G G G     C
      G     + | | |                 T T
      G     G A A C
        T A        T     TCGC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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