The detailed information of tRNA gene sequence


Sequence ID>WENV183776259
Genome IDPPYF01091450
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 587
End posion on genome 499
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcgtaacgt
tRNA gene sequence 
GGAGTCATGCCTGAGTGGCCGATAGGGGCACCCTGCTAAGGTGTTAGTCGTGTAAACGGC
TCGAGGGTTCGAATCCCTCTGACTCCGCCg
Downstream region at tRNA end position 
attaaggttc
Secondary structure (Cloverleaf model)
>WENV183776259	Ser	GCT
                   t      GCCg attaaggttc
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G       + | | |                 T T
    C       T A G G
      C G A        G     TAGTCGTGTAAACGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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