The detailed information of tRNA gene sequence


Sequence ID>WENV183777297
Genome IDPPYF01102682
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 395
End posion on genome 307
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcaggcgtt
tRNA gene sequence 
GGAGAAATACTCAAGTGGCTGAAGAGGTGCCCCTGCTAAGGGTATAGACGGTTTACGCCG
TGCGAGGGTTCAAATCCCTCTTTCTCCGCtg
Downstream region at tRNA end position 
taacaaatag
Secondary structure (Cloverleaf model)
>WENV183777297	Ser	GCT
                   t      GCtg taacaaatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGACGGTTTACGCCGTGC
                    T - A
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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