The detailed information of tRNA gene sequence


Sequence ID>ENV08001478
Genome IDABND01013671
Search identical group
Phylum/Classfish metagenome; viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease
Species
Start position on genome 16
End posion on genome 91
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ttctggtaat
tRNA gene sequence 
GCGGGAATAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGAGGTCGCGAGTTCGAGC
CTCGTTTCCCGCTCCA
Downstream region at tRNA end position 
aaattttgat
Secondary structure (Cloverleaf model)
>ENV08001478	Gly	GCC
                   t      TCCA aaattttgat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          C G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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