The detailed information of tRNA gene sequence


Sequence ID>ENV08001505
Genome IDABNF01004822
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
natgttcttc
tRNA gene sequence 
GGAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
aactntcgac
Secondary structure (Cloverleaf model)
>ENV08001505	Asp	GTC
                   c      GCCA aactntcgac
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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