The detailed information of tRNA gene sequence


Sequence ID>WENV183783118
Genome IDPPYF01222538
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 6461
End posion on genome 6368
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgaactttag
tRNA gene sequence 
GGAAACGTTTCGTCACCGGTGTGGCGCCCAGTCTTCAAAACTGGTGGACGGTCGAAAGGT
CGTTGGTAGGTTCGACTCCTATACGTTTCCGCCA
Downstream region at tRNA end position 
aaaagaatcc
Secondary structure (Cloverleaf model)
>WENV183783118	SeC	TCA
                   g      GCCA aaaagaatcc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C - G
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGTCGAAAGGTCGTTG
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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