The detailed information of tRNA gene sequence


Sequence ID>ENV08001525
Genome IDABNG01016601
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 92
End posion on genome 15
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
caacaaaaac
tRNA gene sequence 
GCAGTAGTGGTGTTTAATGGTTTAGCATACCTGACTTCCAATCAGGTGGTGTCGGTTCGA
ATCCGGTCTACTGCACAA
Downstream region at tRNA end position 
tatgctgaga
Secondary structure (Cloverleaf model)
>ENV08001525	Gly	TCC
                   c      ACAA tatgctgaga
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     T G G C C     A
    A A T T        G      + + | | |     G
  T         T G T G       G T C G G     C
  G         + | | +                 T T
  G         G C A T
    T T T A        A     TGGT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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