The detailed information of tRNA gene sequence


Sequence ID>WENV183783712
Genome IDPPYF01241667
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 45181
End posion on genome 45084
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatatgatat
tRNA gene sequence 
GGGGGTAGTTGGGTGACTGGTGTGCCTCCTGGTCTTCAAAACCAGTGTGGGGCGTTAAGA
GCGTCCCGGGTGGGTTCGATTCCCACATGCCTCCGCCA
Downstream region at tRNA end position 
aaaaagtgtt
Secondary structure (Cloverleaf model)
>WENV183783712	SeC	TCA
                   t      GCCA aaaaagtgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    T     C A C C C     A
      C A G        T      | | | | |     G
    T       T G G G       G T G G G     C
    G       + | | +                 T T
    G       G C C T
      T G T        C     TGTGGGGCGTTAAGAGCGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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