The detailed information of tRNA gene sequence


Sequence ID>WENV183784527
Genome IDPPYF01267059
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 48597
End posion on genome 48512
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acggattttc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGAGGGTCAAACCTCC
GGGGGTTCGAATCCCTCTCTCTCCGCtg
Downstream region at tRNA end position 
aaacaaaaac
Secondary structure (Cloverleaf model)
>WENV183784527	Ser	TGA
                   c      GCtg aaacaaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAGGGTCAAACCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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