The detailed information of tRNA gene sequence


Sequence ID>WENV183786777
Genome IDPPYF01306828
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 1612
End posion on genome 1703
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aattaaatat
tRNA gene sequence 
GCAGATGTACTCAAGAGGTCGTAAGAGGGAGCACTCGAAATGCTTTAGGACAGGAGACTG
TCGCGTGGGTTCGACTCCCACCATCTGCGCCA
Downstream region at tRNA end position 
tatccgtcgt
Secondary structure (Cloverleaf model)
>WENV183786777	Ser	CGA
                   t      GCCA tatccgtcgt
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     C A C C C     A
    G A G A        A      | | | | |     G
  G         A C T C       G T G G G     C
  T           | | |                 T T
  C         A G A G
    G T A          G     TAGGACAGGAGACTGTCGC
                    G + T
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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