The detailed information of tRNA gene sequence


Sequence ID>WENV183786957
Genome IDPPYF01309244
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 3016
End posion on genome 2923
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctgtcgtgc
tRNA gene sequence 
GGAGGCGTGTCGTCACCGGTGTGGCGCCCGGTCTTCAAAACCGGTGGCAGGCTTAACCGT
CTGCGGTAGGTTCGACTCCTATACGCCTCCGCCA
Downstream region at tRNA end position 
tcccgcgaat
Secondary structure (Cloverleaf model)
>WENV183786957	SeC	TCA
                   c      GCCA tcccgcgaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    G     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGCAGGCTTAACCGTCTGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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