The detailed information of tRNA gene sequence


Sequence ID>WENV183788118
Genome IDPPYF01350903
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 6676
End posion on genome 6585
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aattaaatat
tRNA gene sequence 
GCAGATGTACTCAAGAGGTCGTAAGAGGGAGCACTCGAAATGCTTTAGGACAGGAGACTG
TCGCGTGGGTTCGACTCCCACCATCTGCGCCA
Downstream region at tRNA end position 
tatccgtcgt
Secondary structure (Cloverleaf model)
>WENV183788118	Ser	CGA
                   t      GCCA tatccgtcgt
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     C A C C C     A
    G A G A        A      | | | | |     G
  G         A C T C       G T G G G     C
  T           | | |                 T T
  C         A G A G
    G T A          G     TAGGACAGGAGACTGTCGC
                    G + T
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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