The detailed information of tRNA gene sequence


Sequence ID>ENV08001575
Genome IDABNJ01021466
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 46
End posion on genome 119
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
accagtaaat
tRNA gene sequence 
GGGTCGTTAGCTCAGTCGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGAAGGTTCGAAT
CCTTCACGACCCACac
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001575	Lys	TTT
                   t      ACac nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C T T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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