The detailed information of tRNA gene sequence


Sequence ID>WENV183788904
Genome IDPPYF01371051
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 2938
End posion on genome 3031
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctacggcgg
tRNA gene sequence 
GGGGACGTGTCGTCACCGGTGTGGCGCCCGGTCTTCAAAACCGGTGGCAGGCTTTACGGT
CTGCGGTAGGTTCGACTCCTATGCGTCCCCGCCA
Downstream region at tRNA end position 
gatatgctcc
Secondary structure (Cloverleaf model)
>WENV183788904	SeC	TCA
                   g      GCCA gatatgctcc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T + G          T C
                    G     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGCAGGCTTTACGGTCTGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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