The detailed information of tRNA gene sequence


Sequence ID>ENV08001579
Genome IDABNJ01033385
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 15
End posion on genome 90
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aataagtggt
tRNA gene sequence 
GGGTCGTTAGCTCAGTCGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGAAGGTTCGAAT
CCTTCACGACCCACCA
Downstream region at tRNA end position 
cttattactt
Secondary structure (Cloverleaf model)
>ENV08001579	Lys	TTT
                   t      ACCA cttattactt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C T T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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