The detailed information of tRNA gene sequence


Sequence ID>ENV08001582
Genome IDABNJ01037107
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 11
End posion on genome 86
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
caccctctac
tRNA gene sequence 
TCCCCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCAAGT
CCAGTCAGGGGAGCCA
Downstream region at tRNA end position 
atttattctt
Secondary structure (Cloverleaf model)
>ENV08001582	Asn	GTT
                   c      GCCA atttattctt
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    C       C T T G       A C T G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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