The detailed information of tRNA gene sequence


Sequence ID>ENV08001585
Genome IDABNJ01042837
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 103
End posion on genome 28
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tctcggcntt
tRNA gene sequence 
TCCCCGATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGAGT
CCAGGTCGGGGAGCCA
Downstream region at tRNA end position 
aatacagaaa
Secondary structure (Cloverleaf model)
>ENV08001585	Asn	GTT
                   t      GCCA aatacagaaa
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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