The detailed information of tRNA gene sequence


Sequence ID>WENV183791454
Genome IDPPYF01437412
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 37298
End posion on genome 37395
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatatgatat
tRNA gene sequence 
GGGGGTAGTTGGGTGACTGGTGTGCCTCCTGGTCTTCAAAACCAGTGTGGGGCGTTAAGA
GCGTCCCGGGTGGGTTCGATTCCCATATGCCTCCGCCA
Downstream region at tRNA end position 
aaaaagtgtt
Secondary structure (Cloverleaf model)
>WENV183791454	SeC	TCA
                   t      GCCA aaaaagtgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    T     T A C C C     A
      C A G        T      + | | | |     G
    T       T G G G       G T G G G     C
    G       + | | +                 T T
    G       G C C T
      T G T        C     TGTGGGGCGTTAAGAGCGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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