The detailed information of tRNA gene sequence


Sequence ID>WENV183791896
Genome IDPPYF01441688
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 2229
End posion on genome 2326
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agtaagtcat
tRNA gene sequence 
GGGGGTAGATGGGTGACTGGTGTGCCTCCTAGTCTTCAAAACTAGTGTGGGGCGTTAAGA
GCGTCCTGGGTGGGTTCGATTCCCACATGCCTCCGCCA
Downstream region at tRNA end position 
aaagagtaat
Secondary structure (Cloverleaf model)
>WENV183791896	SeC	TCA
                   t      GCCA aaagagtaat
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    A     C A C C C     A
      C A G        T      | | | | |     G
    T       T G G G       G T G G G     C
    G       + | | +                 T T
    G       G C C T
      T G T        C     TGTGGGGCGTTAAGAGCGTCCTGG
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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