The detailed information of tRNA gene sequence


Sequence ID>WENV183792856
Genome IDPPYF01464089
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 453
End posion on genome 546
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cacatgttag
tRNA gene sequence 
GGAAACGTTTCGTCACCGGTGTGGCGCCCAGTCTTCAAAACTGGTGGACGGTCGAAAGGT
CGTTGGTAGGTTCGACTCCTATACGTTTCCGCCA
Downstream region at tRNA end position 
ttattgaata
Secondary structure (Cloverleaf model)
>WENV183792856	SeC	TCA
                   g      GCCA ttattgaata
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C - G
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGTCGAAAGGTCGTTG
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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