The detailed information of tRNA gene sequence


Sequence ID>ENV08001643
Genome IDABNJ01264077
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 9
End posion on genome 82
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
nnacctagat
tRNA gene sequence 
GGGTCGTTAGCTCAGTCGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGAAGGTTCGAAT
CCTTCACGACCCACac
Downstream region at tRNA end position 
ttattactan
Secondary structure (Cloverleaf model)
>ENV08001643	Lys	TTT
                   t      ACac ttattactan
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C T T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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