The detailed information of tRNA gene sequence


Sequence ID>ENV08001694
Genome IDABNY01022656
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 38
End posion on genome 111
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tatttcgggc
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTAGAGCGCCACGTTTACACCGTGGATGTCATCGGTTCGAGC
CCGGTAGGGCCCACtt
Downstream region at tRNA end position 
cgnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001694	Val	TAC
                   c      ACtt cgnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          C G
                    T     T G G C C     A
      T G A        A      | + | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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