The detailed information of tRNA gene sequence


Sequence ID>ENV08001695
Genome IDABNY01023764
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 100
End posion on genome 18
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tccacctttt
tRNA gene sequence 
GCGGGTGTGGTGAAATTGGTAGACACGCTAGATTTAGGATCTAGTGCTTCACGGCGTGGG
GGTTCGAGTCCCTTCACCCGCACac
Downstream region at tRNA end position 
aaacctcaac
Secondary structure (Cloverleaf model)
>ENV08001695	Leu	TAG
                   t      ACac aaacctcaac
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     G
    T       A G T G       G G G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCTTCACGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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