The detailed information of tRNA gene sequence


Sequence ID>ENV08001699
Genome IDABNY01027832
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 101
End posion on genome 17
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ctagcgcaat
tRNA gene sequence 
GGCAAGTTACCCAAGCGGCCAAAGGGATCTGACTGTAAATCAGCCGGCGTAGCCTTCGGG
GGTTCGAATCCCTCACTTGCCACAA
Downstream region at tRNA end position 
cgttgatagc
Secondary structure (Cloverleaf model)
>ENV08001699	Tyr	GTA
                   t      ACAA cgttgatagc
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    G       A C C C       G G G G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCGTAGCCTTC
                    T   C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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