The detailed information of tRNA gene sequence


Sequence ID>ENV08001723
Genome IDABNZ01007285
Search identical group
Phylum/Classsaltern metagenome; viral fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 100
End posion on genome 25
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tgatcctttT
tRNA gene sequence 
GCCCGTATAGCTCAATTGGATCGAGCATCGGATTTCTACTCCGACGGTTGTAGGTTCGAG
TCCTACTACGGGCGTtt
Downstream region at tRNA end position 
tactttctct
Secondary structure (Cloverleaf model)
>ENV08001723	Arg	TCT
                   T      GTtt tactttctct
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A
                     A - T          T G
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T C        A     CGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       C
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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