The detailed information of tRNA gene sequence


Sequence ID>ENV08001747
Genome IDABOD01003404
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 112
End posion on genome 37
Amino Acid Pseudo
Anticodon AGG
Upstream region at tRNA start position 
nnccggacgc
tRNA gene sequence 
GGGCCGGTGGGGTAGCCTGGTATCCTTCGGCCTTAGGGTGGCCGTAACCGCAGTTCGAAT
CTGCGCCGGCCCATCA
Downstream region at tRNA end position 
cgcccgcgcg
Secondary structure (Cloverleaf model)
>ENV08001747	Pseudo	AGG
                   c      ATCA cgcccgcgcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G C G T C     A
      C G A        G      | | | | |     G
    C       T G G G       C G C A G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  T       T
                  T       G
                    A G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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