The detailed information of tRNA gene sequence


Sequence ID>ENV08001749
Genome IDABOE01001976
Search identical group
Phylum/Classsaltern metagenome; viral fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 36
End posion on genome 112
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aaaacttagt
tRNA gene sequence 
ACGACTGTAGCTCAGTTGGTTAGAGCACTACCTTGACATGGTAGGGGTCGGTGGTTCGAA
TCCACTCAGTCGTACCA
Downstream region at tRNA end position 
atccaaaaaa
Secondary structure (Cloverleaf model)
>ENV08001749	Val	GAC
                   t      ACCA atccaaaaaa
                     A - T
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          T A
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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