The detailed information of tRNA gene sequence


Sequence ID>WENV170000002
Genome IDAERA01000297
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 2678
End posion on genome 2768
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcttggcga
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCGGCGCTTTGCTAAAGCGTTATACGGCAAAACCGT
ATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
taagttattg
Secondary structure (Cloverleaf model)
>WENV170000002	Ser	GCT
                   a      GCCA taagttattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGCAAAACCGTATC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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