The detailed information of tRNA gene sequence


Sequence ID>WENV170000029
Genome IDAERA01001882
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 4474
End posion on genome 4398
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgggttcgt
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCAAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
aattcctttg
Secondary structure (Cloverleaf model)
>WENV170000029	Met	CAT
                   t      ACCA aattcctttg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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